CDS

Accession Number TCMCG051C17027
gbkey CDS
Protein Id XP_024458093.1
Location complement(join(9657532..9657634,9658079..9658116,9658199..9658319,9658403..9658472,9658938..9659108,9659230..9659404,9659703..9659890,9660300..9660443,9660609..9660672,9660761..9660853,9660944..9661029,9661761..9661901,9661993..9662139,9662458..9662545,9663066..9663233,9663662..9663775))
Gene LOC18099284
GeneID 18099284
Organism Populus trichocarpa

Protein

Length 636aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024602325.1
Definition succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category C
Description Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q)
KEGG_TC -
KEGG_Module M00009        [VIEW IN KEGG]
M00011        [VIEW IN KEGG]
M00148        [VIEW IN KEGG]
KEGG_Reaction R02164        [VIEW IN KEGG]
KEGG_rclass RC00045        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00234        [VIEW IN KEGG]
EC 1.3.5.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00020        [VIEW IN KEGG]
ko00190        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
ko04714        [VIEW IN KEGG]
ko04932        [VIEW IN KEGG]
ko05010        [VIEW IN KEGG]
ko05012        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
map00020        [VIEW IN KEGG]
map00190        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
map04932        [VIEW IN KEGG]
map05010        [VIEW IN KEGG]
map05012        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
GOs GO:0000104        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005740        [VIEW IN EMBL-EBI]
GO:0005743        [VIEW IN EMBL-EBI]
GO:0005746        [VIEW IN EMBL-EBI]
GO:0005749        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006091        [VIEW IN EMBL-EBI]
GO:0006099        [VIEW IN EMBL-EBI]
GO:0006101        [VIEW IN EMBL-EBI]
GO:0006119        [VIEW IN EMBL-EBI]
GO:0006121        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006163        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009055        [VIEW IN EMBL-EBI]
GO:0009060        [VIEW IN EMBL-EBI]
GO:0009061        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009123        [VIEW IN EMBL-EBI]
GO:0009126        [VIEW IN EMBL-EBI]
GO:0009141        [VIEW IN EMBL-EBI]
GO:0009144        [VIEW IN EMBL-EBI]
GO:0009150        [VIEW IN EMBL-EBI]
GO:0009161        [VIEW IN EMBL-EBI]
GO:0009167        [VIEW IN EMBL-EBI]
GO:0009199        [VIEW IN EMBL-EBI]
GO:0009205        [VIEW IN EMBL-EBI]
GO:0009259        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015980        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016627        [VIEW IN EMBL-EBI]
GO:0016999        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019693        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0019866        [VIEW IN EMBL-EBI]
GO:0022900        [VIEW IN EMBL-EBI]
GO:0022904        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031966        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042773        [VIEW IN EMBL-EBI]
GO:0042775        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044455        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045257        [VIEW IN EMBL-EBI]
GO:0045273        [VIEW IN EMBL-EBI]
GO:0045281        [VIEW IN EMBL-EBI]
GO:0045283        [VIEW IN EMBL-EBI]
GO:0045333        [VIEW IN EMBL-EBI]
GO:0046034        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0070469        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072350        [VIEW IN EMBL-EBI]
GO:0072521        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098798        [VIEW IN EMBL-EBI]
GO:0098800        [VIEW IN EMBL-EBI]
GO:0098803        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990204        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTGGCGCTGCGTGGCTCGTGGCCTTCGCCTTCCTTCTTCTTCTTCCTCGACGAAGATATTATCTAATGACTCTTTCAGATTTCACAGTACCAGATTTTTCTCTGCCGATTCTACTGGGGGGGGATCCTCATACACGGTTGTGGATCATACTTATGATGCGGTTGTAGTAGGAGCAGGCGGTGCGGGCTTGAGAGCTGCTATTGGACTTTCAGAGCATGGATTCAATACAGCTTGCATTACCAAGCTTTTTCCCACTCGATCGCACACTGTTGCGGCTCAGGGTGGTATTAATGCTGCTCTGGGAAATATGACCGAGGATGATTGGAGATGGCACATGTATGACACTGTCAAGGGAAGTGACTGGTTAGGTGATCAGGATGCCATCCAATACATGTGTAGGGAGGCACCAAAAGCAGTCATTGAACTTGAGAACTACGGATTACCTTTTTCTCGAACAGAAGATGGAAAAATTTATCAGCGTGCATTTGGGGGTCAAAGTTTGGATTTTGGGAAAGGTGGGCAGGCATATCGTTGTGCGTGTGCTGCTGACAGAACTGGGCATGCTCTTTTGCATACTCTCTATGGCCAAGCTATGAGACACAATACACAATTTTTTGTGGAATATTTTGCTTTGGATCTATTAATGAATAATGATGGTAGCTGCCAAGGAGTGATTGCACTGAATATGGAAGATGGGACATTGCATCGCTTCTGTGCTGCTTCAACAATTCTGGCTACAGGGGGATATGGTAGAGCATACTTTTCAGCAACCTCAGCACATACATGCACTGGAGATGGCAATGCAATGGTTGCCCGGGCCGGGGTTCCACTTGAGGATTTGGAGTTTGTTCAGTTTCATCCTACAGGCATATACGGAGCGGGGTGCCTTATTACAGAAGGATCTCGTGGTGAAGGTGGTATTCTTAGGAACAGTGAAGGTGAGCGATTTATGGAAAGGTATGCACCTACAGCCAAGGATCTTGCTTCAAGAGATGTCGTTTCAAGATCCATGACCATGGAAATTCGGGAGGGTCGTGGTGTAGGACCTTTGAAGGACCATATATATCTGCACTTGAATCACTTGCCCCCAGATGTGCTCAAGGAGAGGCTTCCTGGTATCTCTGAAACTGCTGCCATTTTTGCTGGTGTGGATGTTACAAAGGAACCCATCCCTGTCCTACCGACCGTGCATTATAATATGGGTGGGATTCCCACAAATTACCATGGAGAGGTAGTTACCCTTAAAGGTGACGATCCAGATGCAGTTGTTCCTGGATTAATGGCTGCTGGAGAGGCAGCCTGTGCTTCAGTTCATGGTGCCAACCGGCTTGGTGCAAATTCTCTTCTTGACATTGTTGTGTTTGGCCGAGCTTGTGCAAATAGAGTAGCCAAAATCCATAGACCAGGTGAGAAACAGAAACCTTTGGAAAAGGATGCTGGAGAGAGGACTATTGCATGGCTGGATAAACTAAGAAATTCAAATGGATCACTTTCAACTTCACACATTCGGTTAAATATGCAGAGGACAATGCAGAACAATGCTGCTGTTTTCCGCACACAAGAAACATTGGAAGAGGGTTGTCACTTGATTGATAAGGCATGGGAAAGCTTTCATGATGTGAAAGTGAAAGATCGGAGTTTAATATGGAACTCTGACTTAATTGAGACACTGGAGTTGGAAAACCTTTTGATAAATGCCTGTGTAACTATGCACTCTGCTGAAGCCCGGAAAGAGAGCAGGGGAGCACATGCCCGTGAAGATTTCACCAAAAGAGATGATGAGAACTGGATGAAGCATACTCTGGGATATTGGGAGAATGAGAAGGTCCGACTGGATTACAGGCCAGTTCACATGAACACGTTAGATGATGAGATTGAGCCATTCCCGCCGAAGGCTCGTGTTTATTGA
Protein:  
MWRCVARGLRLPSSSSSTKILSNDSFRFHSTRFFSADSTGGGSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMRHNTQFFVEYFALDLLMNNDGSCQGVIALNMEDGTLHRFCAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGVPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTLKGDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAKIHRPGEKQKPLEKDAGERTIAWLDKLRNSNGSLSTSHIRLNMQRTMQNNAAVFRTQETLEEGCHLIDKAWESFHDVKVKDRSLIWNSDLIETLELENLLINACVTMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKVRLDYRPVHMNTLDDEIEPFPPKARVY